SEEK ID: https://armlifebank.am/people/2
Location:
Armenia
ORCID:
https://orcid.org/0000-0002-6851-1056
Joined: 16th Feb 2024
Expertise: Not specified
Tools: Not specified



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Admin
Project administrator
- Sex-specific differences in long-term gamma and simGCRsim-associated alterations in deferential gene expression in the heart tissue
- Functional Genomics of Vine
- Molecular Profiling of Cancer Metastases
- Omics-Based Insights into Human Long-Term Exposure to Environmental Metals
- Biological pathway activity analysis
- ML approaches for omic data analysis
- Tools for Telomere Biology
- Molecular characterization of cancers with long-read RNA sequencing
- Low dose radiation risks: present research and future perspectives
Programme administrator
Related items
- Programmes (7)
- Projects (12)
- Institutions (2)
- Data files (3)
- Models (2)
- Publications (22)
- Presentations (1)
- Documents (2)
- Sample types (1)
- Samples (4)
This Programme sumarizes scientific events and associated documents.
Projects: Low dose radiation risks: present research and future perspectives
Web page: Not specified
The Plant Genomics Programme focuses on the comprehensive characterization of plant genetic resources, aiming to understand the factors that shape genetic variation across plant genomes and drive phenotypic diversity in traits of adaptive and economic importance. The research explores the genetic architecture of plant adaptation to changing climatic conditions and investigates the genomic determinants of genetic diversity. A key objective is the integration of multi-omics data into innovative ...
Projects: Functional Genomics of Vine, Armenian Wine Genome Program
Web page: Not specified
This Programme focuses on the development, implementation, and application of bioinformatics tools for the analysis of large-scale genomic datasets. It aims to facilitate the processing, integration, and interpretation of high-throughput sequencing data, including whole-genome, transcriptome, and epigenome analyses. The Programme encompasses computational approaches for variant discovery, gene expression profiling, network biology, and multi-omics data integration.
Projects: Biological pathway activity analysis, ML approaches for omic data analysis, Tools for Telomere Biology
Web page: Not specified
Cellular dysfunction, the fundamental basis of all human diseases, underpins the pathophysiology of numerous disorders. This program presents a overview of research initiatives focused on advancing human health through the development of diagnostic, preventive, and therapeutic strategies. These projects are conducted in collaboration with multiple research institutions and are supported by diverse grant funding mechanisms.
Projects: Study of the molecular mechanisms of familial Mediterranean fever using genetic engineering and functional genomics, Development of induced pluripotent stem cells bank of patients with Familial Mediterranean Fever
Web page: Not specified
This program is designed to encapsulate and facilitate research projects focusing on the intricate dynamics between genetic predispositions and environmental factors in the progression of chronic diseases, excluding cancer. This initiative aims to unravel the molecular mechanisms and pathways that underlie these diseases, thereby paving the way for targeted interventions and therapies.
Projects: Mental disorders and aging brain, Omics-Based Insights into Human Long-Term Exposure to Environmental Metals
Web page: Not specified
Long-term environmental exposure to metals leads to epigenetic changes and may increase risks to human health. The human epidemiologic and the toxicologic animal model studies provide strong evidence of metal exposure related DNA methylation changes, and, consequently alterations in gene expression, in metabolic, genetic and signal transduction pathways and their functions. The current study is designed to investigate genome wide DNA methylation and transcriptomic changes induced by human chronic ...
Programme: Genes, Environment and Chronic Diseases
Public web page: Not specified
Start date: 1st Feb 2020
Organisms: Human
The “Low dose radiation risks: present research and future perspectives” Advanced Research Workshop is a NATO (North Atlantic Treaty Organization)-sponsored workshop organized by the McMaster University (Canada) and Institute of Molecular Biology NAS RA (National Academy of Sciences of Republic of Armenia) which offers a unique opportunity to learn about new discoveries and exchange experience with professionals in the field of radioecology, radiobiology, country-specific regulatory agencies, ...
Programme: Events
Public web page: https://imb.am/rad2025/
Organisms: Not specified
Principal Investigator: Prof. Hans Binder
University: University of Leipzig
Research Group: Kristina Margaryan, Maria Nikoghosyan, Tomas Konecny, Anush Baloyan, Hripsime Gasoyan, Emma Hovhannisyan, Levon Galstyan, Duan Shengchang
Duration: 2023-2027
Co-implementing and hosting partner: Armenian Bioinformatics Institute (ABI) and Institute of Molecular Biology
Project Importance The cultivated grape (Vitis vinifera) has become the world’s leading fruit crop. Grape is unique not only because it is ...
Programme: Plant Genomics & Bioinformatics
Public web page: https://www.fast.foundation/en/program/847/2022/new_tab/6586/6677
Organisms: Grapevine
21AG-1F021
Programme: Cancer Omics
Public web page: Not specified
Organisms: Not specified
Space radiation (IR) from Solar Particle Events (SPE) and Galactic Cosmic Rays (GCR), also known as high charge and energy (HZE) IR, is a primary risk associated with deep-space missions. There are limited animal and human studies on the risk of cardiovascular disease (CVD) development due to space-IR. The cardiac effects induced by space-type IR, specifically simplified GCR simulated (simGCRsim)-IR, are yet to be discovered. We hypothesized that gamma (γ) and simGCRsim IR-induced biological ...
Programme: Space Radiobiology
Public web page: Not specified
Start date: 1st Jul 2023
End date: 30th Jun 2027
Organisms: Mouse
Sequencing raw data.
Creators: Arsen Arakelyan, Siras Hakobyan
Submitter: Arsen Arakelyan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
This dataset provides data necessary to replicate the results of the time-perturbation analysis of gene expression in health and mental disorders. The corresponding code is available in the GitHub repository under the https://github.com/susieavagyan/BrainExp-TemporalDynamics link.
Creator: Arsen Arakelyan
Submitter: Arsen Arakelyan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
This dataset provides data necessary to replicate the results of the time-perturbation analysis of gene expression in health and mental disorders. The corresponding code is available in the GitHub repository under the https://github.com/susieavagyan/BrainExp-TemporalDynamics link.
Creator: Arsen Arakelyan
Submitter: Arsen Arakelyan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
The Pathway Signal Flow (PSF) toolkit is an R package designed for pathway editing and signal flow analysis. It enables users to perform PSF analysis on functional -omics data, facilitating the study of signaling pathways in various biological contexts.
Key Features:
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Pathway Editing: Allows customization and editing of biological pathways to suit specific research needs.
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Signal Flow Calculation: Computes signal flow within pathways based on gene expression data, aiding in the ...
Creators: Arsen Arakelyan, Siras Hakobyan
Submitter: Arsen Arakelyan
Model type: Not specified
Model format: Not specified
Environment: Not specified
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
KEGG pathway database is a collection of manually drawn pathway maps representing current knowledge on molecular interaction and reaction networks, accompanied with KGML (KEGG pathway xml format) files for automatic computational analyses and modeling of metabolic and signaling networks. In a KGML file the pathway is represented as a graph object with entry elements (gene products, compounds, pathways) as its nodes, and relations between elements as edges. However, in most cases there is a lack ...
Creator: Arsen Arakelyan
Submitter: Arsen Arakelyan
Model type: Not specified
Model format: Not specified
Environment: Matlab
Organism: Not specified
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Abstract (Expand)
Authors: A. Stepanyan, A. Arakelyan, J. Schug
Date Published: 24th Mar 2025
Publication Type: Journal
PubMed ID: 40023890
Citation: Environ Int. 2025 Mar;197:109344. doi: 10.1016/j.envint.2025.109344. Epub 2025 Feb 21.
Abstract (Expand)
Authors: A. Stepanyan, A. Brojakowska, R. Zakharyan, S. Hakobyan, S. Davitavyan, T. Sirunyan, G. Khachatryan, M. K. Khlgatian, M. Bisserier, S. Zhang, S. Sahoo, L. Hadri, A. Rai, V. N. S. Garikipati, A. Arakelyan, D. A. Goukassian
Date Published: 28th Dec 2024
Publication Type: Journal
PubMed ID: 39732652
Citation: Cardiovasc Diabetol. 2024 Dec 28;23(1):454. doi: 10.1186/s12933-024-02565-9.
Abstract (Expand)
Authors: Varduhi Hayrapetyan, Lana Karapetyan, Lilit Ghukasyan, Sofi Atshemyan, Hovsep Ghazaryan, Valentina Vardanyan, Vahan Mukuchyan, Arsen Arakelyan, Roksana Zakharyan
Date Published: 2nd Dec 2024
Publication Type: Journal
Citation: International Journal of Molecular Sciences,25(23):12958
Abstract (Expand)
Authors: Lilit Ghukasyan, Gisane Khachatryan, Tamara Sirunyan, Arpine Minasyan, Siras Hakobyan, Andranik Chavushyan, Varduhi Hayrapetyan, Hovsep Ghazaryan, Gevorg Martirosyan, Gohar Mkrtchyan, Valentina Vardanyan, Vahan Mukuchyan, Ashot Davidyants, Roksana Zakharyan, Arsen Arakelyan
Date Published: 29th Nov 2024
Publication Type: Journal
DOI: 10.3389/fgene.2024.1493295
Citation: Frontiers in Genetics,15
Abstract (Expand)
Authors: M. Hakobyan, H. Binder, A. Arakelyan
Date Published: 2nd Jul 2024
Publication Type: Journal
PubMed ID: 38763334
Citation: J Biol Chem. 2024 Jun;300(6):107392. doi: 10.1016/j.jbc.2024.107392. Epub 2024 May 18.
Creator: Arsen Arakelyan
Submitter: Arsen Arakelyan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Creator: Arsen Arakelyan
Submitter: Arsen Arakelyan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Patient-specific induced pluripotent stem cells (iPSCs) are reprogrammed somatic cells derived from individual patients through the expression of key transcription factors (e.g., OCT4, SOX2, KLF4, and c-MYC). These cells exhibit pluripotency, allowing them to differentiate into various cell types and serve as in vitro models for studying disease mechanisms, drug screening, and regenerative medicine.
Sample Name (String) *, Type (String) *, Condition (String) *, Link (String) , Location (String)
Not specified
Type: Patient-specific induced pluripotent stem cells (iPSCs)
Creators: Arsen Arakelyan, Lana Karapetyan, Roksana Zakharyan
Submitter: Arsen Arakelyan
Type: Patient-specific induced pluripotent stem cells (iPSCs)
Creators: Arsen Arakelyan, Lana Karapetyan, Roksana Zakharyan
Submitter: Arsen Arakelyan
Type: Patient-specific induced pluripotent stem cells (iPSCs)
Creators: Arsen Arakelyan, Lana Karapetyan, Roksana Zakharyan
Submitter: Arsen Arakelyan
Type: Patient-specific induced pluripotent stem cells (iPSCs)
Creators: Arsen Arakelyan, Lana Karapetyan, Roksana Zakharyan
Submitter: Arsen Arakelyan