Space radiation (IR) from Solar Particle Events (SPE) and Galactic Cosmic Rays (GCR), also known as high charge and energy (HZE) IR, is a primary risk associated with deep-space missions. There are limited animal and human studies on the risk of cardiovascular disease (CVD) development due to space-IR. The cardiac effects induced by space-type IR, specifically simplified GCR simulated (simGCRsim)-IR, are yet to be discovered. We hypothesized that gamma (γ) and simGCRsim IR-induced biological responses are chronic, IR type-dependent, and may increase the relative risk for developing CVD during and after long-duration space missions. Further, we hypothesize that there may be sex-specific differences in IR-associated alterations in CV function and structure. To test our hypotheses, we exposed 3-month-old male and female age-matched C57Bl/6J wild-type (WT) mice to 137Cs-γ-IR at 100 cGy, 0.662 MeV and simGCRsim-IR at 50 cGy 500 MeV/n. We assessed cardiac function by transthoracic echocardiography (ECHO) at 28 days, and 12, 16, 22/18.5 (male/female)-months post-IR. To evaluate sex-associated differences in the regulation of the transcriptional landscape, total RNA isolated from male and female LV hearts was sequenced with Illumina NGS. Sequenced reads were splice-aligned to the mm10 mouse reference genome using the STAR aligner. Raw read counts were normalized with the DESeq2 R package and converted to log2 CPM values. Differential expression analysis and downstream bioinformatics analysis were performed using the oposSOM R package.
Programme: Space Radiobiology
SEEK ID: https://armlifebank.am/projects/3
Public web page: Not specified
Organisms: Mouse
ArmLifeBank PALs: No PALs for this Project
Project start date: 1st Jul 2023
Project end date: 30th Jun 2027
Related items
Projects: Sex-specific differences in long-term gamma and simGCRsim-associated alterations in deferential gene expression in the heart tissue, Functional Genomics of Vine, Molecular Profiling of Cancer Metastases, Omics-Based Insights into Human Long-Term Exposure to Environmental Metals, Biological pathway activity analysis, ML approaches for omic data analysis, Tools for Telomere Biology, Mental disorders and aging brain, Armenian Wine Genome Program, Study of the molecular mechanisms of familial Mediterranean fever using genetic engineering and functional genomics, Molecular characterization of cancers with long-read RNA sequencing, Low dose radiation risks: present research and future perspectives
Institutions: Institute of Molecular Biology NAS RA, Armenian Bioinformatics Institute

Projects: Biological pathway activity analysis, Sex-specific differences in long-term gamma and simGCRsim-associated alterations in deferential gene expression in the heart tissue, ML approaches for omic data analysis, Molecular characterization of cancers with long-read RNA sequencing
Institutions: Institute of Molecular Biology NAS RA

Expertise: Bioinformatics
Tools: Cytoscape, Genomics, Microarray analysis, Python, R, Single Cell analysis, Transcriptomics
Siras Hakobyan is currently a Junior Researcher and PhD student in the Research Group of Bioinformatics at the Institute of Molecular Biology NAS RA in Yerevan, Armenia. He received his Master's and Bachelor's degrees in Bioinformatics from Yerevan State University, completing his studies in 2018 and 2016. His PhD project focuses on pathway-centered analysis of high-throughput omics data, particularly examining pathway activity states in cancers based on pathway topology, gene expression, and ...
Projects: Study of the molecular mechanisms of familial Mediterranean fever using genetic engineering and functional genomics, Development of induced pluripotent stem cell bank of patients with Familial Mediterranean Fever, Molecular Profiling of Cancer Metastases, Sex-specific differences in long-term gamma and simGCRsim-associated alterations in deferential gene expression in the heart tissue, Molecular characterization of cancers with long-read RNA sequencing, ML approaches for omic data analysis, Mental disorders and aging brain, Armenian Wine Genome Program, Functional Genomics of Vine, COVID-19, Genetic History of Armenians, Molecular epidemiology of multi-drug resistance, Multi-Omics Molecular Diversity of Cancers
Institutions: Russian-Armenian University, Institute of Molecular Biology NAS RA

Principal Investigator: Prof. David Goukassian
University: Icahn School of Medicine at Mount Sinai
Research team: Recruitment in progress
Duration:2023-2027
Hosting partner: Institute of Molecular Biology NAS RA (IMB)
Project Importance The high likelihood of developing genomic instability due to exposure to ionizing radiation suggests that exposure can cause DNA damage to hematopoietic stem cells (HSCs), promoting the development of somatic mutations that can lead to aberrant clonal events. ...
Web page: https://fast.foundation/en/program/847/2022/new_tab/6586/7014
The cited in the main text supporting Supplementary Figures and Data can be downloaded at https://doi.org/10.5281/zenodo.15624414 and the datasets can be downloaded using the following accession numbers GSE272168 for the left ventricle RNAseq dataset and GSE300189 for the right ventricle RNAseq dataset. Any additional datasets used and/or analyzed in this study are available from the corresponding authors upon request at the reasonable timeframe. Preprocessed raw gene expression count matrices ...
Creator: Siras Hakobyan
Submitter: Lana Karapetyan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Sequencing raw data.
Creators: Arsen Arakelyan, Siras Hakobyan
Submitter: Arsen Arakelyan
Investigations: No Investigations
Studies: No Studies
Assays: No Assays
Abstract (Expand)
Authors: Roksana Zakharyan, Siras Hakobyan, Agnieszka Brojakowska, Malik Bisserier, Shihong Zhang, Mary K. Khlgatian, Amit Kumar Rai, Suren Davitavyan, Ani Stepanyan, Tamara Sirunyan, Gisane Khachatryan, Susmita Sahoo, Venkata Naga Srikanth Garikipati, Arsen Arakelyan, David A. Goukassian
Date Published: 21st Jul 2025
Publication Type: Journal
DOI: 10.1038/s41526-025-00506-8
Citation: npj Microgravity,11(1)
Abstract (Expand)
Authors: Roksana Zakharyan, Siras Hakobyan, Agnieszka Brojakowska, Suren Davitavyan, Ani Stepanyan, Tamara Sirunyan, Gisane Khachatryan, Mary K. Khlgatian, Malik Bisserier, Shihong Zhang, Susmita Sahoo, Lahouaria Hadri, Venkata Naga Srikanth Garikipati, Arsen Arakelyan, David A. Goukassian
Date Published: 18th Feb 2025
Publication Type: Journal
DOI: 10.1038/s41598-025-89815-2
Citation: Scientific Reports,15(1)
Abstract (Expand)
Authors: A. Stepanyan, A. Brojakowska, R. Zakharyan, S. Hakobyan, S. Davitavyan, T. Sirunyan, G. Khachatryan, M. K. Khlgatian, M. Bisserier, S. Zhang, S. Sahoo, L. Hadri, A. Rai, V. N. S. Garikipati, A. Arakelyan, D. A. Goukassian
Date Published: 28th Dec 2024
Publication Type: Journal
PubMed ID: 39732652
Citation: Cardiovasc Diabetol. 2024 Dec 28;23(1):454. doi: 10.1186/s12933-024-02565-9.
Abstract (Expand)
Authors: Amit Kumar Rai, K. Shanmugha Rajan, Malik Bisserier, Agnieszka Brojakowska, Aimy Sebastian, Angela C. Evans, Matthew A. Coleman, Paul J. Mills, Arsen Arakelyan, Shizuka Uchida, Lahouaria Hadri, David A. Goukassian, Venkata Naga Srikanth Garikipati
Date Published: 24th Jun 2022
Publication Type: Journal
Citation: Frontiers in Cardiovascular Medicine,9
Abstract (Expand)
Authors: Malik Bisserier, Agnieszka Brojakowska, Nathaniel Saffran, Amit Kumar Rai, Brooke Lee, Matthew Coleman, Aimy Sebastian, Angela Evans, Paul J. Mills, Sankar Addya, Arsen Arakelyan, Venkata Naga Srikanth Garikipati, Lahouaria Hadri, David A. Goukassian
Date Published: 16th Jun 2022
Publication Type: Journal
Citation: Frontiers in Cardiovascular Medicine,9