Data files

We aimed to develop an affordable nanopore sequencing method for detecting full-length MEFV gene mutations, which would aid in the diagnosis and screening of FMF. We employed a multiplex amplicon sequencing approach, allowing for the processing of up to 12 samples on both Flow cells and Flongle flow cells. The results demonstrated near-complete concordance between nanopore variant calling and qPCR genotypes. Moreover, nanopore sequencing identified additional variants confirmed by whole exome ...

Genotype data produced by HaplotypeCaller and Illumina genotyping datа

This supplementary dataset contains complete results of the analysis of disease associated SNPs distribution across geographic regions.

1. SNP_SOM_all_populations.zip - an archive with the results of SOM-portrayal of geographical diversity of disease-associated SNPs

2. SNP_zoomSOM_armenians.zip - an archive with the results of SOM-portrayal of geographical diversity of disease-associated SNPs of selected populations from Europe, Middle East, Central-South Asia and Armenians.

Links to Individual Files in the Dataset

This study included 299 SARS-CoV-2 infected patients. During April-May 2020, blood and nasopharyngeal swab samples from patients were collected in six hospitals of the Health Ministry of the Republic of Armenia: National Center for Infection Diseases, Surb Grigor Lusavorich, Surb Astvatsamayr and Artashat Medical Centres, Maralik and Akhuryan Mother and Child Health Centers. The diagnosis was performed on nasopharyngeal specimens by detection of SARS-CoV-2 ...

Datasets for Publication

Sequencing of SARS-CoV-2 provides essential information on viral evolution, transmission, and epidemiology. In this study, we performed whole-genome sequencing of SARS-CoV-2 using nanopore and Illumina short-read sequencing to describe the circulation of the virus lineage in Armenia.

This dataset contains Nextstrain configuration files, the auspice JSON file, BEAST output logs, and trees files, and resulting log and tree files as well as R scripts and data files used in phylogenetic and functional ...