Data files

This is the submission accompanying raw result files for multiple-layer SOM (ml-SOM) analysis for the paper "Transcriptome patterns of BRCA1- and BRCA2- mutated breast and ovarian cancers".

The dataset contains the results of the ml-SOM analysis of RNA-sequencing data from TCGA-OV (ovarian cancer) and TCGA-BRCA (breast cancer) projects.

The dataset is organized as follows:

Folder "12.BC.40 - Results" - ml-SOM analysis of TCGA-BRCA (breast cancer) dataset Folder "12.OV.40 - Results" - ml-SOM ...

This is a supplementary dataset with raw data, scripts, and complete analysis results for the paper "Supervised projection of high-dimensional genome-wide expression on SOM transcriptome landscapes".

The archive contains three folders:

1. "Simdata" folder contains data, scripts, and results of performance evaluation of extension SOM and supervised SOM with simulated data.

2. "IBD" - folder contains data, scripts, and results of analysis of Inflammatory bowel disease datasets.

3. "BC" - folder ...